STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX58Probable ATP-dependent RNA helicase DHX58 isoform X1. (678 aa)    
Predicted Functional Partners:
LOC102728857
Probable ATP-dependent RNA helicase DDX58-like.
 
 
 0.997
USP18
Ubl carboxyl-terminal hydrolase 18; Belongs to the peptidase C19 family.
   
 
 0.937
MAVS
LOW QUALITY PROTEIN: mitochondrial antiviral-signaling protein.
    
 0.912
ISG15
Ubiquitin-like protein ISG15.
   
 0.891
RECQL5
ATP-dependent DNA helicase Q5.
   
 0.882
OASL
2'-5'-oligoadenylate synthase-like protein isoform X1.
   
 0.859
IRF7
Interferon regulatory factor 7.
   
 0.840
FANCL
E3 ubiquitin-protein ligase FANCL isoform X1.
    
 0.812
MEIOB
Meiosis-specific with OB domain-containing protein.
    
 0.808
FANCG
Fanconi anemia group G protein.
    
 0.802
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.