STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102746195DLA class I histocompatibility antigen, A9/A9 alpha chain-like. (189 aa)    
Predicted Functional Partners:
B2M
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
 0.997
LOC102746412
Replication protein A 32 kDa subunit-like.
   
 0.997
RPA4
LOW QUALITY PROTEIN: replication protein A4, 30kDa.
   
 0.997
CD8A
T-cell surface glycoprotein CD8 alpha chain.
    
 0.978
LOC102730741
Natural killer cells antigen CD94-like.
    
 0.944
CALR
Calreticulin.
    
 0.915
LOC102738924
Immunoglobulin iota chain-like.
    
  0.907
LOC102743896
Thioredoxin; Belongs to the thioredoxin family.
    
 0.876
LOC102738640
AP complex subunit beta.
    
  0.868
LOC102733223
Protein disulfide-isomerase A3-like; Belongs to the protein disulfide isomerase family.
    
 0.864
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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