STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHH1Pleckstrin homology domain-containing family H member 1. (1365 aa)    
Predicted Functional Partners:
LOC102733953
Zinc finger FYVE domain-containing protein 26-like.
      
 0.646
RRAD
GTP-binding protein; Belongs to the small GTPase superfamily. RGK family.
      
 0.549
RBBP7
Histone-binding protein RBBP7 isoform X1.
      
 0.493
KIAA0408
Uncharacterized protein KIAA0408 homolog.
      
 0.493
LOC102741776
DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.
      
 0.489
CLCA4
Calcium-activated chloride channel regulator 4.
      
 0.477
ESF1
ESF1 homolog.
      
 0.476
KLHL5
Kelch-like protein 5 isoform X1.
      
 0.451
PLEKHB1
Pleckstrin homology domain-containing family B member 1 isoform X1.
      
 0.400
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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