STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB1Zinc finger and BTB domain-containing protein 1 isoform X1. (713 aa)    
Predicted Functional Partners:
LSMEM1
Leucine-rich single-pass membrane protein 1.
      
 0.712
PLEKHG1
Pleckstrin homology domain-containing family G member 1.
      
 0.694
PTPLAD1
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
    
 0.622
ETNPPL
Ethanolamine-phosphate phospho-lyase isoform X1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
      
 0.616
LOC102731633
Rho guanine nucleotide exchange factor 10-like.
      
 0.540
RAD18
E3 ubiquitin-protein ligase RAD18.
      
 0.538
ANKMY1
Ankyrin repeat and MYND domain-containing protein 1.
    
 
 0.510
CCDC42
Coiled-coil domain-containing protein 42A.
    
 
 0.499
LOC102740961
Coiled-coil domain-containing protein 42A-like.
    
 
 0.499
GNAZ
Guanine nucleotide-binding protein G(Z) subunit alpha.
    
 0.496
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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