STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD17Cell cycle checkpoint protein RAD17. (634 aa)    
Predicted Functional Partners:
RFC3
Replication factor C subunit 3.
   
 0.999
RFC4
Replication factor C subunit 4.
   
 0.999
RFC2
Replication factor C subunit 2 isoform X1.
    
 0.999
RFC5
Replication factor C subunit 5 isoform X1.
   
0.999
HUS1
Checkpoint protein; Belongs to the HUS1 family.
   
 0.995
RAD9A
Cell cycle checkpoint control protein; Belongs to the rad9 family.
   
 0.991
RAD1
Cell cycle checkpoint protein RAD1.
   
 0.977
ANKRD32
Ankyrin repeat domain-containing protein 32 isoform X1.
   
 0.932
ATM
Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...]
   
 0.911
ATRIP
ATR-interacting protein.
    
 0.908
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
Server load: low (28%) [HD]