STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLCA2Colorectal cancer-associated protein 2. (189 aa)    
Predicted Functional Partners:
RLF
Zinc finger protein Rlf.
      
 0.752
LOC102741561
Uncharacterized protein C11orf53 homolog.
  
   
 0.677
ARHGAP20
Rho GTPase-activating protein 20-like.
      
 0.540
POU2AF1
POU domain class 2-associating factor 1.
      
 0.540
BTG4
Protein BTG4.
      
 0.493
LAYN
Layilin.
      
 0.491
NRSN1
Neurensin-1.
      
 0.489
ZC3H12C
Probable ribonuclease ZC3H12C.
      
 0.485
LOC102733455
Sodium/potassium/calcium exchanger 3-like; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.478
CRYBA2
Beta-crystallin A2 isoform X1; Belongs to the beta/gamma-crystallin family.
      
 0.477
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.