STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UTP18U3 small nucleolar RNA-associated protein 18 homolog. (555 aa)    
Predicted Functional Partners:
CIRH1A
Cirhin.
   
 0.999
UTP15
U3 small nucleolar RNA-associated protein 15 homolog isoform X1.
   
 0.999
UTP6
U3 small nucleolar RNA-associated protein 6 homolog.
   
 0.999
TBL3
Transducin beta-like protein 3.
   
 0.999
WDR36
WD repeat-containing protein 36.
   
 0.999
WDR3
WD repeat-containing protein 3.
   
 0.999
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.998
PMEL
Melanocyte protein PMEL isoform X1.
   
 0.998
UTP3
Something about silencing protein 10.
   
 0.998
UTP14A
U3 small nucleolar RNA-associated protein 14 homolog A isoform X1.
   
 0.998
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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