STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPLHeterogeneous nuclear ribonucleoprotein L isoform X1. (588 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.964
LOC102746671
Heterogeneous nuclear ribonucleoprotein R-like.
   
 0.896
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1.
   
 0.894
HNRNPU
Heterogeneous nuclear ribonucleoprotein U isoform X1.
   
 0.881
LOC102740606
SUMO-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.838
SRSF1
Serine/arginine-rich splicing factor 1 isoform X1.
   
 0.832
DHX9
ATP-dependent RNA helicase A.
   
 
 0.826
LOC102749155
Serine/arginine-rich splicing factor 3-like.
 
 
 0.821
TRA2B
Transformer-2 protein homolog beta.
   
 0.811
HNRNPM
Heterogeneous nuclear ribonucleoprotein M isoform X1.
   
 0.805
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.