STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC85BCoiled-coil domain-containing protein 85B. (202 aa)    
Predicted Functional Partners:
ZNF358
Zinc finger protein 358.
      
 0.769
ZNF575
Zinc finger protein 575.
      
 0.569
TRIP6
Thyroid receptor-interacting protein 6.
      
 0.547
ZNF771
Zinc finger protein 771 isoform X1.
      
 0.541
CCDC59
Thyroid transcription factor 1-associated protein 26.
      
 0.539
ZNF75D
Zinc finger protein 75D-like.
      
 0.539
ZNF296
Zinc finger protein 296.
      
 0.497
MALSU1
Mitochondrial assembly of ribosomal large subunit protein 1.
      
 0.495
PKIA
cAMP-dependent protein kinase inhibitor; Belongs to the PKI family.
      
 0.493
SIVA1
Apoptosis regulatory protein Siva; Induces CD27-mediated apoptosis. Inhibits BCL2L1 isoform Bcl- x(L) anti-apoptotic activity. Inhibits activation of NF-kappa-B and promotes T-cell receptor-mediated apoptosis.
      
 0.493
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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