STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PACS1Phosphofurin acidic cluster sorting protein 1 isoform X1. (961 aa)    
Predicted Functional Partners:
PKD2
Polycystin-2.
      
 0.700
LOC102749117
Sorting nexin.
      
 0.699
PCSK4
Proprotein convertase subtilisin/kexin type 4; Belongs to the peptidase S8 family.
    
 
 0.641
FURIN
Furin; Belongs to the peptidase S8 family.
    
 
 0.641
RIC8B
synembryn-B.
      
 0.547
KCTD20
BTB/POZ domain-containing protein KCTD20 isoform X1.
      
 0.546
RUNDC3A
RUN domain-containing protein 3A isoform X1.
      
 0.545
LRRC56
Leucine-rich repeat-containing protein 56.
    
 
 0.496
ARFIP1
Arfaptin-1 isoform X1.
      
 0.480
ELP2
Elongator complex protein 2 isoform X1.
      
 0.479
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.