STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102728335RNA-binding protein Nova-1-like isoform X1. (507 aa)    
Predicted Functional Partners:
CELF3
CUGBP Elav-like family member 3 isoform X1.
      
 0.673
MEX3B
RNA-binding protein MEX3B isoform X1.
      
 0.579
PTBP2
Polypyrimidine tract-binding protein 2 isoform X2.
    
 
 0.563
NTN1
Netrin-1-like.
      
 0.546
PRSS53
Serine protease 53; Belongs to the peptidase S1 family.
      
 0.540
TREM2
Triggering receptor expressed on myeloid cells 2.
   
  
 0.500
LOC102741936
Trem-like transcript 1 protein-like.
   
  
 0.500
PTBP1
Polypyrimidine tract-binding protein 1 isoform X1.
    
 
 0.489
DNM1
Dynamin-1 isoform X2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.489
LOC102748304
Splicing factor, suppressor of white-apricot homolog.
      
 0.487
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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