STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIN4Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4. (108 aa)    
Predicted Functional Partners:
LOC102730626
Single-stranded DNA-binding protein, mitochondrial-like.
  
 
 0.698
EPRS
Bifunctional glutamate/proline--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.613
FKBP1A
Peptidylprolyl isomerase.
   
 
 0.567
FKBP1B
Peptidylprolyl isomerase.
   
 
 0.567
CLPP
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.561
LOC102731655
Sorting and assembly machinery component 50 homolog.
  
 
 0.553
LOC102735731
Mitochondrial inner membrane protein COX18-like isoform X1.
  
  
 0.532
GPHN
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
  
 
 0.524
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1.
   
    0.504
NDUFA12
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
    0.497
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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