STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102727227Protein FAM136A-like. (138 aa)    
Predicted Functional Partners:
DTNA
Dystrobrevin alpha isoform X2.
      
 0.741
FAM69A
Protein FAM69A isoform X1.
      
 0.732
PPP6R2
Serine/threonine-protein phosphatase 6 regulatory subunit 2.
      
 0.732
SEMA3D
LOW QUALITY PROTEIN: semaphorin-3D; Belongs to the semaphorin family.
      
 0.695
ZPLD1
Zona pellucida-like domain-containing protein 1.
      
 0.577
TECTA
Alpha-tectorin.
      
 0.547
LOC102727679
Potassium voltage-gated channel subfamily A member 10-like; Belongs to the potassium channel family.
      
 0.546
UGCG
Ceramide glucosyltransferase.
      
 0.539
TIMM10
Mitochondrial import inner membrane translocase subunit Tim10.
   
  
 0.455
ACSL5
long-chain-fatty-acid--CoA ligase 5 isoform X2.
    
 
 0.432
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.