STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAFAH1B1Platelet-activating factor acetylhydrolase IB subunit alpha. (148 aa)    
Predicted Functional Partners:
PAFAH1B3
Platelet-activating factor acetylhydrolase IB subunit gamma.
    
 0.963
LOC102736866
Cytoplasmic dynein 1 heavy chain 1-like.
   
 0.944
NUDC
Nuclear migration protein nudC.
   
 0.929
LOC102734471
Dynactin subunit 1-like.
    
 0.918
DCTN2
Dynactin subunit 2 isoform X2.
    
 0.912
DYNLL1
Dynein light chain.
    
 0.900
LOC102746856
Platelet-activating factor acetylhydrolase IB subunit alpha-like isoform X1.
 
      0.900
LOC102743356
Platelet-activating factor acetylhydrolase 2, cytoplasmic-like.
     
 0.857
NDE1
Nuclear distribution protein nudE homolog 1.
    
 
 0.855
POC1A
POC1 centriolar protein homolog A-like.
 
  
  0.855
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.