STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPM7Transient receptor potential cation channel subfamily M member 7. (1731 aa)    
Predicted Functional Partners:
LOC102746542
Transient receptor potential cation channel subfamily M member 2-like.
  
  
0.789
TRPC1
Short transient receptor potential channel 1 isoform X1; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.735
TRPV4
Transient receptor potential cation channel subfamily V member 4; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.694
LOC102742727
Transient receptor potential cation channel subfamily V member 1-like.
   
 
 0.669
TRPV3
Transient receptor potential cation channel subfamily V member 3; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.665
PDS5A
Sister chromatid cohesion protein PDS5 homolog A isoform X2.
   
    0.654
NUDT9
ADP-ribose pyrophosphatase, mitochondrial isoform X1.
 
   
 0.618
TRPV6
Transient receptor potential cation channel subfamily V member 6; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.607
STIM1
Stromal interaction molecule 1.
      
 0.560
TRPA1
Transient receptor potential cation channel subfamily A member 1; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.540
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.