STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102743418Ral GTPase-activating protein subunit beta-like. (247 aa)    
Predicted Functional Partners:
ADIG
LOW QUALITY PROTEIN: adipogenin.
      
 0.742
SLC34A2
Sodium-dependent phosphate transport protein 2B.
      
 0.693
RALGAPA1
Ral GTPase-activating protein subunit alpha-1 isoform X1.
   
 0.688
LOC102730529
Ral GTPase-activating protein subunit alpha-2-like.
   
 0.688
PPP1R16A
Protein phosphatase 1 regulatory subunit 16A.
      
 0.658
LOC102729821
NHL repeat-containing protein 2-like.
     
 0.601
LOC102738630
Glycine N-phenylacetyltransferase-like.
      
 0.598
GLYAT
Glycine N-acyltransferase.
      
 0.598
RNF111
E3 ubiquitin-protein ligase Arkadia isoform X1.
   
    0.596
ECH1
delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
      
 0.585
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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