STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGF2BP1Insulin-like growth factor 2 mRNA-binding protein 1 isoform X1. (577 aa)    
Predicted Functional Partners:
RPH3AL
LOW QUALITY PROTEIN: rab effector Noc2.
      
 0.730
LOC102735112
M-phase phosphoprotein 6-like.
      
 0.698
LOC102730357
U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...]
   
  
 0.650
IGF2
Insulin-like growth factor II.
      
 0.638
LOC102728198
YTH domain family protein 1-like isoform X1.
    
 
 0.633
LOC102729839
Probable ATP-dependent RNA helicase YTHDC2-like.
    
 
 0.602
CBLL1
E3 ubiquitin-protein ligase Hakai isoform X1.
      
 0.594
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1.
    
 
 0.571
METTL13
Methyltransferase-like protein 13 isoform X1.
      
 0.555
ABHD17A
Alpha/beta hydrolase domain-containing protein 17A.
      
 0.554
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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