STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBLCP1Ubiquitin-like domain-containing CTD phosphatase 1. (310 aa)    
Predicted Functional Partners:
LOC102733981
26S proteasome non-ATPase regulatory subunit 2-like.
   
 0.994
LOC102729219
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
   
 0.994
PSMD11
26S proteasome non-ATPase regulatory subunit 11.
   
 0.978
PSMC2
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.976
PSMD7
26S proteasome non-ATPase regulatory subunit 7-like.
   
 0.975
CSF3
Granulocyte colony-stimulating factor.
   
 0.975
PSMC5
26S protease regulatory subunit 8; Belongs to the AAA ATPase family.
   
 0.974
PSMD6
26S proteasome non-ATPase regulatory subunit 6 isoform X1.
   
 0.974
LOC102735127
26S protease regulatory subunit 4-like isoform X1; Belongs to the AAA ATPase family.
   
 0.973
PSMD8
LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 8.
   
 0.972
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
Server load: low (22%) [HD]