STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGM2Protein-glutamine gamma-glutamyltransferase 2-like. (548 aa)    
Predicted Functional Partners:
FN1
Fibronectin isoform X1.
    
 0.752
TSG101
Tumor susceptibility gene 101 protein isoform X1.
   
  
 0.625
LOC102738400
Annexin.
   
 0.588
F13B
Coagulation factor XIII B chain.
    
 0.561
PDLIM1
PDZ and LIM domain protein 1.
   
  
 0.549
RSU1
Ras suppressor protein 1 isoform X1.
      
 0.544
AHSP
Alpha-hemoglobin-stabilizing protein.
   
  
 0.518
PDLIM5
PDZ and LIM domain protein 5 isoform X1.
      
 0.473
EVI2A
Protein EVI2A.
      
 0.473
LOC102726821
Galectin.
   
  
 0.463
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.