STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB36Ras-related protein Rab-36 isoform X1. (267 aa)    
Predicted Functional Partners:
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.875
KIAA1432
Protein RIC1 homolog isoform X1.
    
 0.812
BICD2
Protein bicaudal D homolog 2.
    
 0.796
VPS33B
Vacuolar protein sorting-associated protein 33B isoform X1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.795
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha isoform X2.
    
 0.792
ARL1
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
   
 0.740
VPS52
Vacuolar protein sorting-associated protein 52 homolog isoform X1.
    
 0.731
ARFRP1
ADP-ribosylation factor-related protein 1 isoform X1.
    
 0.706
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.699
VPS53
Vacuolar protein sorting-associated protein 53 homolog.
    
 0.693
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.