STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPR149Probable G-protein coupled receptor 149. (734 aa)    
Predicted Functional Partners:
GNL3
Guanine nucleotide-binding protein-like 3.
   
 0.791
GPR139
Probable G-protein coupled receptor 139.
      
 0.769
NOP58
Nucleolar protein 58 isoform X1.
  
 
 0.745
WDR12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.734
STK32A
Serine/threonine-protein kinase 32A; Belongs to the protein kinase superfamily.
    
 
 0.733
GTPBP4
Nucleolar GTP-binding protein 1.
   
 
 0.726
DHX36
Probable ATP-dependent RNA helicase DHX36 isoform X1.
 
 
 0.711
FTSJ3
pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
 0.704
LOC102734854
Splicing factor 3B subunit 1-like.
   
 0.702
POLDIP3
Polymerase delta-interacting protein 3.
   
 0.701
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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