STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF215RING finger protein 215. (318 aa)    
Predicted Functional Partners:
UBOX5
RING finger protein 37 isoform X1.
     
 0.682
UBA52
ubiquitin-60S ribosomal protein L40 isoform X3.
    
 0.651
ASB8
Ankyrin repeat and SOCS box protein 8 isoform X1.
      
 0.582
RNF185
E3 ubiquitin-protein ligase RNF185 isoform X1.
      
 0.551
MARCH2
E3 ubiquitin-protein ligase MARCH2 isoform X1.
      
 0.547
RFFL
E3 ubiquitin-protein ligase rififylin.
      
 0.543
RSPO2
R-spondin-2 isoform X1.
    
 0.537
UBR1
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.516
SYVN1
E3 ubiquitin-protein ligase synoviolin.
    
 
 0.516
LOC102729387
F-box only protein 7-like.
    
 0.511
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.