STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBPCellular nucleic acid-binding protein isoform X1. (177 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
  
 0.869
LOC102735935
Putative ribosomal RNA methyltransferase 2-like.
   
 
 0.764
CISD3
CDGSH iron-sulfur domain-containing protein 3, mitochondrial.
      
 0.744
DNAJC30
dnaJ homolog subfamily C member 30.
    
 
 0.679
MBNL3
Muscleblind-like protein 3-like isoform X1.
      
 0.655
LOC102746152
Muscleblind-like protein 3-like.
      
 0.655
RNF34
E3 ubiquitin-protein ligase RNF34.
   
  
 0.623
RPL27A
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.622
GIN1
Gypsy retrotransposon integrase-like protein 1.
    
 
 0.581
MEX3D
RNA-binding protein MEX3D.
      
 0.581
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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