STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNNI3Troponin I, cardiac muscle isoform X1. (211 aa)    
Predicted Functional Partners:
TNNC1
Troponin C, slow skeletal and cardiac muscles.
   
 0.999
TNNT3
Troponin T, fast skeletal muscle.
 
 
 0.994
SMIM20
Small integral membrane protein 20.
   
 0.989
TNNC2
Troponin C, skeletal muscle.
   
 0.983
TPM3
Tropomyosin alpha-3 chain isoform X1; Belongs to the tropomyosin family.
   
 0.971
TPM2
Tropomyosin alpha-4 chain isoform X1; Belongs to the tropomyosin family.
   
 0.949
TPM4
Tropomyosin alpha-4 chain; Belongs to the tropomyosin family.
   
 0.949
PDDC1
Parkinson disease 7 domain-containing protein 1.
   
 0.943
PRKACA
cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.
     
 0.897
PRKACB
cAMP-dependent protein kinase catalytic subunit beta isoform X1; Belongs to the protein kinase superfamily.
     
 0.893
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.