STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTL5Tesmin. (511 aa)    
Predicted Functional Partners:
LOC102741568
Protein lin-54 homolog.
 
      0.900
LIN9
Protein lin-9 homolog isoform X1.
   
 0.893
LIN37
Protein lin-37 homolog.
    
 0.881
LIN52
Protein lin-52 homolog.
    
 0.874
RBL1
Retinoblastoma-like protein 1.
   
 0.824
MYBL2
Myb-related protein B.
    
 0.807
RBBP4
Histone-binding protein RBBP4.
   
 0.799
RBBP7
Histone-binding protein RBBP7 isoform X1.
   
 0.799
TNP1
Spermatid nuclear transition protein 1.
      
 0.765
WDR73
WD repeat-containing protein 73.
   
 0.756
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.