STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP8B2Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1208 aa)    
Predicted Functional Partners:
TMEM30A
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.772
GPR26
G-protein coupled receptor 26.
      
 0.757
TGFBRAP1
Transforming growth factor-beta receptor-associated protein 1.
      
 0.696
TMEM30B
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.639
RBM12
RNA-binding protein 12.
      
 0.633
LOC102731375
Biorientation of chromosomes in cell division protein 1-like 1-like.
      
 0.630
BOD1L1
Biorientation of chromosomes in cell division protein 1-like 1.
      
 0.630
ASB12
Ankyrin repeat and SOCS box protein 12-like isoform X1.
   
 
 0.616
RLIM
E3 ubiquitin-protein ligase RLIM isoform X3.
      
 0.608
NME8
Thioredoxin domain-containing protein 3.
    
 0.571
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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