STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CABP2Calcium-binding protein 2. (234 aa)    
Predicted Functional Partners:
LOC102742614
Peripheral plasma membrane protein CASK-like.
    
 0.762
ARL3
ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.
   
 0.736
ODF1
Outer dense fiber protein 1.
   
    0.661
TECTA
Alpha-tectorin.
   
 0.626
SLITRK6
SLIT and NTRK-like protein 6.
    
 0.593
STRC
Stereocilin-like.
    
 
 0.540
TNNI3
Troponin I, cardiac muscle isoform X1.
   
 0.532
GRXCR2
Glutaredoxin domain-containing cysteine-rich protein 2.
      
 0.503
SHROOM1
Protein Shroom1.
      
 0.501
GRXCR1
Glutaredoxin domain-containing cysteine-rich protein 1.
      
 0.485
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.