STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTUD4OTU domain-containing protein 4. (1110 aa)    
Predicted Functional Partners:
RNF216
E3 ubiquitin-protein ligase RNF216 isoform X1.
     
 0.789
SACS
Sacsin isoform X1.
     
 0.762
ZNF598
Zinc finger protein 598.
   
 
 0.713
GAN
Gigaxonin.
      
 0.696
SMARCE1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1.
      
 0.642
UBA52
ubiquitin-60S ribosomal protein L40 isoform X3.
    
  0.622
LOC102736824
Dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide-like.
      
 0.618
UBQLN4
Ubiquilin-4.
    
 0.583
LOC102743697
Probable ubiquitin carboxyl-terminal hydrolase FAF-X-like.
   
 
 0.582
SLC35F6
Solute carrier family 35 member F6; May play a role as a nucleotide-sugar transporter.
   
  
 0.576
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.