STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLG1LOW QUALITY PROTEIN: Golgi apparatus protein 1. (641 aa)    
Predicted Functional Partners:
SELE
E-selectin.
    
 0.938
CCDC88A
Girdin isoform X2.
   
    0.856
LOC102726134
Protein Njmu-R1.
      
 0.767
FAM91A1
Protein FAM91A1.
      
 0.695
LOC102748485
WD repeat-containing protein 59-like.
      
 0.649
CASP8
Caspase-8 isoform X1; Belongs to the peptidase C14A family.
      
 0.634
LOC102728750
L-selectin-like.
    
 0.621
TM9SF2
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
  
 0.548
LOC102734313
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
  
 0.548
NUFIP2
Nuclear fragile X mental retardation-interacting protein 2.
      
 0.495
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.