STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFXANKDNA-binding protein RFXANK. (260 aa)    
Predicted Functional Partners:
TMEM69
Transmembrane protein 69 isoform X1.
      
 0.670
CAMKMT
Calmodulin-lysine N-methyltransferase.
      
 0.668
HDAC4
Histone deacetylase 4-like.
    
 0.661
CIB3
Calcium and integrin-binding family member 3 isoform X1.
    
 0.631
RFX4
Transcription factor RFX4.
    
 0.626
LOC102725622
Transcription factor RFX3-like.
    
 0.622
NR2C2AP
Nuclear receptor 2C2-associated protein.
    
 0.618
RFX6
DNA-binding protein RFX6.
    
 0.600
LOC102750023
Thioredoxin domain-containing protein 12-like.
      
 0.599
METAP1
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.551
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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