STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLAGL1Zinc finger protein PLAGL1 isoform X2. (463 aa)    
Predicted Functional Partners:
SGCE
Epsilon-sarcoglycan isoform X2.
      
 0.667
MEST
Mesoderm-specific transcript homolog protein-like isoform X1.
   
 
 0.604
DIRAS3
GTP-binding protein Di-Ras3.
    
 0.584
NNAT
Neuronatin isoform X1.
   
  
 0.574
NAP1L5
Nucleosome assembly protein 1-like 5; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.561
PHLDA2
Pleckstrin homology-like domain family A member 2.
      
 0.545
SLC18A1
Chromaffin granule amine transporter isoform X1.
      
 0.539
GATM
Glycine amidinotransferase, mitochondrial.
    
 0.526
GRB10
Growth factor receptor-bound protein 10.
      
 0.508
LIX1
Protein limb expression 1 homolog.
      
 0.497
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.