STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUSD1Sushi domain-containing protein 1. (716 aa)    
Predicted Functional Partners:
CCDC115
Coiled-coil domain-containing protein 115.
    
 
 0.775
SUSD2
Sushi domain-containing protein 2.
     
 0.771
AP5M1
AP-5 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.
      
 0.769
HSPA4L
Heat shock 70 kDa protein 4L.
    
 0.727
CNTN3
Contactin-3.
    
 0.702
YES1
Tyrosine-protein kinase.
    
 0.685
CNTN2
Contactin-2.
    
 0.617
GABRA1
Gamma-aminobutyric acid receptor subunit alpha-1 isoform X1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.599
GMFG
Glia maturation factor gamma isoform X1.
      
 0.547
GMFB
Glia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily.
      
 0.547
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.