STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNOP1Lysine-rich nucleolar protein 1. (459 aa)    
Predicted Functional Partners:
DRG1
Developmentally-regulated GTP-binding protein 1.
      
 0.620
LOC102745581
Developmentally-regulated GTP-binding protein 1-like.
      
 0.620
WDR38
WD repeat-containing protein 38.
      
 0.599
CHRNG
Acetylcholine receptor subunit gamma.
      
 0.477
JPH4
Junctophilin; Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels.
      
 0.474
KIAA1919
LOW QUALITY PROTEIN: sodium-dependent glucose transporter 1.
      
 0.473
KNG1
Kininogen-1 isoform X1.
  
     0.446
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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