STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGR4Synaptogyrin. (234 aa)    
Predicted Functional Partners:
PLEKHB1
Pleckstrin homology domain-containing family B member 1 isoform X1.
      
 0.754
SYP
Synaptophysin.
    
 
 0.731
MXD3
Max dimerization protein 3.
      
 0.661
RAB3A
Ras-related protein Rab-3A.
   
  
 0.609
LOC102746562
C-myc promoter-binding protein-like.
      
 0.593
SPACA4
Sperm acrosome membrane-associated protein 4.
      
 0.580
LOC102747428
Calmodulin-binding transcription activator 1-like isoform X1.
      
 0.578
MAK
Serine/threonine-protein kinase MAK isoform X1.
   
    0.566
DOK3
Docking protein 3.
      
 0.480
SYN2
Synapsin-2.
   
  
 0.477
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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