STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPR34Probable G-protein coupled receptor 34; Belongs to the G-protein coupled receptor 1 family. (378 aa)    
Predicted Functional Partners:
TMEM119
Transmembrane protein 119.
      
 0.593
P2RY12
P2Y purinoceptor 12.
   
 
0.589
CSF1R
Macrophage colony-stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
  
 0.502
LOC102738979
Adenosine receptor A3-like.
   
  
 0.501
TREM2
Triggering receptor expressed on myeloid cells 2.
   
  
 0.486
LOC102741936
Trem-like transcript 1 protein-like.
   
  
 0.486
P2RX6
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
      
 0.470
CHRNA6
Neuronal acetylcholine receptor subunit alpha-6 isoform X1.
      
 0.428
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.