STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF3Transcription factor E2-alpha isoform X1. (654 aa)    
Predicted Functional Partners:
ID1
DNA-binding protein inhibitor ID-1.
    
 
 0.999
LOC102745156
Catenin beta-1-like isoform X1.
    
 0.922
LYL1
Protein lyl-1.
    
 0.902
MYOD1
Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.
    
 0.854
MYOG
Myogenin.
   
 0.839
MYF5
Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.
    
 0.759
ID2
DNA-binding protein inhibitor ID-2 isoform X2.
    
 
 0.709
LDB2
LIM domain-binding protein 2-like isoform X1.
    
 0.683
ASCL2
Achaete-scute homolog 2.
   
 0.682
CREBBP
CREB-binding protein-like.
    
 0.641
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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