STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VEGFBVascular endothelial growth factor B isoform X1; Belongs to the PDGF/VEGF growth factor family. (207 aa)    
Predicted Functional Partners:
LOC102727755
Latrophilin-3-like; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.999
LOC102744705
Latrophilin-1-like.
    
 
 0.999
LPHN2
Latrophilin-2-like isoform X1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.999
LOC102735329
Vascular endothelial growth factor receptor 1-like.
    
 0.990
FGFR2
Fibroblast growth factor receptor 2.
    
 0.914
PDGFRA
Platelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development.
    
 0.914
TEK
Angiopoietin-1 receptor isoform X1.
    
 0.898
PGF
Placenta growth factor; Belongs to the PDGF/VEGF growth factor family.
     
0.886
VEGFC
Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family.
     
0.882
PDGFB
Platelet-derived growth factor subunit B isoform X1; Belongs to the PDGF/VEGF growth factor family.
     
0.881
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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