STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102735609Nuclear envelope pore membrane protein POM 121-like. (409 aa)    
Predicted Functional Partners:
RANBP2
E3 SUMO-protein ligase RanBP2.
     
 0.842
NUP188
Nucleoporin NUP188 homolog.
     
 0.665
NUP35
Nucleoporin NUP53.
   
 
 0.592
NUP50
Nuclear pore complex protein Nup50.
   
 
 0.591
NUP43
Nucleoporin Nup43.
     
 0.587
NUP155
Nuclear pore complex protein Nup155 isoform X1.
    
  0.580
LOC102735965
Nuclear pore complex protein Nup205-like.
    
  0.557
NUP93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 0.555
LOC102736637
Nuclear pore complex protein Nup93-like.
   
 0.555
LOC102731231
Cleavage and polyadenylation specificity factor subunit 6-like.
     
 0.500
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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