STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPIFB3BPI fold-containing family B member 3. (472 aa)    
Predicted Functional Partners:
PCP4L1
Purkinje cell protein 4-like protein 1.
      
 0.732
BPIFA3
LOW QUALITY PROTEIN: BPI fold-containing family A member 3.
      
 0.549
TEX261
Protein TEX261.
      
 0.549
TTC13
Tetratricopeptide repeat protein 13 isoform X1.
      
 0.548
PCK1
Phosphoenolpyruvate carboxykinase, cytosolic [GTP] isoform X2.
    
 
 0.496
BPIFB2
BPI fold-containing family B member 2.
  
 
0.488
TM4SF20
Transmembrane 4 L6 family member 20.
      
 0.487
ST7L
Suppressor of tumorigenicity 7 protein-like.
      
 0.478
CA2
Carbonic anhydrase 2; Belongs to the alpha-carbonic anhydrase family.
      
 0.477
BPIFA1
BPI fold-containing family A member 1.
   
 0.476
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.