STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM175Transmembrane protein 175. (498 aa)    
Predicted Functional Partners:
PCGF3
Polycomb group RING finger protein 3.
      
 0.684
TMEM17
Transmembrane protein 17.
      
 0.648
PQLC2
Lysosomal amino acid transporter 1 homolog.
      
 0.607
SLC38A7
Putative sodium-coupled neutral amino acid transporter 7.
      
 0.580
DGKQ
Diacylglycerol kinase.
      
 0.547
DNAJC6
Putative tyrosine-protein phosphatase auxilin.
      
 0.477
SGPL1
Sphingosine-1-phosphate lyase 1.
      
 0.473
MCOLN3
Mucolipin-3 isoform X1.
      
 0.472
OSTM1
Osteopetrosis-associated transmembrane protein 1.
      
 0.434
KPTN
Kaptin.
      
 0.404
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.