STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOM1L2TOM1-like protein 2 isoform X1; Belongs to the TOM1 family. (507 aa)    
Predicted Functional Partners:
RAI1
Retinoic acid-induced protein 1.
   
  
 0.750
RABGEF1
Rab5 GDP/GTP exchange factor.
     
 0.628
LOC102727257
Tumor necrosis factor receptor superfamily member 13B-like.
      
 0.582
ARF6
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.574
MET
Hepatocyte growth factor receptor.
    
  0.571
LOC102740168
Hepatocyte growth factor receptor-like; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.571
FLCN
Folliculin.
      
 0.565
LOC102745950
Cell division cycle-associated protein 2-like.
      
 0.549
LOC102750322
polyubiquitin-B-like.
    
   0.543
UBA52
ubiquitin-60S ribosomal protein L40 isoform X3.
    
   0.533
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.