STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LUMLumican. (289 aa)    
Predicted Functional Partners:
COL1A2
Collagen alpha-2(I) chain.
   
 
 0.999
SPARC
SPARC isoform X2.
   
  
 0.999
LOC102726566
Fibrillin-1-like.
   
 0.999
LOC102727675
Decorin; May affect the rate of fibrils formation.
  
  
0.941
SPARCL1
SPARC-like protein 1.
   
  
 0.856
TGFB2
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.842
FBN2
Fibrillin-2.
   
 0.841
MATN4
Matrilin-4 isoform X2.
   
 0.836
LOC102745146
Tumor necrosis factor ligand superfamily member 6-like; Belongs to the tumor necrosis factor family.
    
 0.833
FASLG
Tumor necrosis factor ligand superfamily member 6.
    
 0.833
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.