STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102747428Calmodulin-binding transcription activator 1-like isoform X1. (277 aa)    
Predicted Functional Partners:
DIXDC1
Dixin isoform X1.
      
 0.635
COQ4
Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides; Belongs to the COQ4 family.
      
 0.635
NOL8
Nucleolar protein 8.
      
 0.631
LOC102746562
C-myc promoter-binding protein-like.
   
  
 0.589
SYNGR4
Synaptogyrin.
      
 0.578
DEDD
Death effector domain-containing protein isoform X1.
      
 0.493
H6PD
GDH/6PGL endoplasmic bifunctional protein.
      
 0.489
MYCBPAP
MYCBP-associated protein.
      
 0.489
TRMT1
tRNA (guanine(26)-N(2))-dimethyltransferase.
      
 0.487
LZIC
Protein LZIC isoform X1.
      
 0.487
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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