STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPM2Tropomyosin alpha-4 chain isoform X1; Belongs to the tropomyosin family. (284 aa)    
Predicted Functional Partners:
ACTC1
Actin, alpha cardiac muscle 1 isoform X1.
   
 0.965
ACTG2
Actin, gamma-enteric smooth muscle.
   
 0.965
LOC102730020
Myosin-7-like.
   
 0.952
TNNI3
Troponin I, cardiac muscle isoform X1.
   
 0.949
TNNT3
Troponin T, fast skeletal muscle.
   
 0.895
SMIM20
Small integral membrane protein 20.
   
 0.869
TFG
Protein TFG isoform X2.
   
 0.807
TPM3
Tropomyosin alpha-3 chain isoform X1; Belongs to the tropomyosin family.
  
 
 
0.801
TPR
Nucleoprotein TPR-like isoform X1.
     
 0.797
LOC102728321
High affinity nerve growth factor receptor-like.
    
 0.775
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.