STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBA52ubiquitin-60S ribosomal protein L40 isoform X3. (128 aa)    
Predicted Functional Partners:
LOC102744677
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.999
RPL34
60S ribosomal protein L34.
   
 
 0.999
LOC102749211
60S ribosomal protein L30-like.
   
 0.999
RPL27A
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 0.999
RPS8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.999
LOC102749116
60S ribosomal protein L39-like.
   
 0.999
RPL24
60S ribosomal protein L24 isoform X1.
   
 0.999
RPS29
40S ribosomal protein S29.
   
 0.999
RABGEF1
Rab5 GDP/GTP exchange factor.
    
 0.999
LOC102741457
60S ribosomal protein L9-like.
   
 0.999
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.