STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GALNT4Polypeptide N-acetylgalactosaminyltransferase. (582 aa)    
Predicted Functional Partners:
GCNT3
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3.
     
 0.862
C1GALT1
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.
     
 0.845
C1GALT1C1
C1GALT1-specific chaperone 1.
     
 0.831
B3GNT6
Hexosyltransferase.
    
 0.801
B3GNT3
Hexosyltransferase.
    
 0.801
ST6GALNAC1
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
     
 0.795
CARD14
LOW QUALITY PROTEIN: caspase recruitment domain family, member 14.
      
 0.482
SPDEF
SAM pointed domain-containing Ets transcription factor.
      
 0.474
ZNF329
Zinc finger protein 329.
      
 0.469
MAN1A1
Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA.
      
 0.445
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.