STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPHA1Ephrin type-A receptor 1. (976 aa)    
Predicted Functional Partners:
EFNA1
ephrin-A1 isoform X1; Belongs to the ephrin family.
   
 0.990
LOC102728392
ephrin-A5-like; Belongs to the ephrin family.
   
 0.985
LOC102733359
ephrin-A4-like; Belongs to the ephrin family.
   
 0.929
ABL1
Tyrosine-protein kinase ABL1-like.
   
0.905
RASA1
Ras GTPase-activating protein 1.
   
 0.895
ITSN2
Intersectin-2.
   
 0.854
INPPL1
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2.
    
 0.832
EFNB3
ephrin-B3; Belongs to the ephrin family.
   
 0.820
LOC102741827
ephrin-B1-like; Belongs to the ephrin family.
   
 0.746
PSEN2
Presenilin-2.
    
 0.647
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.