STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIGNL1Fidgetin-like protein 1; Belongs to the AAA ATPase family. (676 aa)    
Predicted Functional Partners:
NAPG
Gamma-soluble NSF attachment protein.
    
 0.798
IST1
IST1 homolog isoform X1.
    
 0.786
SWSAP1
ATPase SWSAP1.
    
 
 0.775
LOC102737512
Uncharacterized protein C7orf72 homolog.
   
  
 0.743
TMEM194A
Transmembrane protein 194A.
   
  
 0.732
LOC102726250
Ubiquitin fusion degradation protein 1 homolog.
    
 0.729
DEPDC1B
DEP domain-containing protein 1B isoform X1.
   
  
 0.707
CCDC34
Coiled-coil domain-containing protein 34.
    
 
 0.702
RIBC2
RIB43A-like with coiled-coils protein 2.
    
 
 0.698
CEP85
Centrosomal protein of 85 kDa.
      
 0.695
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.