STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDHR2Cadherin-related family member 2. (1308 aa)    
Predicted Functional Partners:
USH1C
Harmonin.
   
 
 0.911
LOC102750159
Junction plakoglobin-like.
    
 0.608
LOC102745156
Catenin beta-1-like isoform X1.
    
 0.608
JUP
Junction plakoglobin.
    
 0.608
TSPAN1
Tetraspanin.
     
 0.590
LOC102741057
Four-jointed box protein 1-like.
   
 0.565
LOC102738651
Afadin-like.
   
 
 0.530
CTNND1
Catenin delta-1 isoform X2.
    
 0.521
CTNND2
Catenin delta-2.
    
 0.521
ARVCF
Armadillo repeat protein deleted in velo-cardio-facial syndrome.
    
 0.521
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.