STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ILF2Interleukin enhancer-binding factor 2. (234 aa)    
Predicted Functional Partners:
LOC102748695
Interleukin enhancer-binding factor 2-like.
 
     0.948
ILF3
Interleukin enhancer-binding factor 3.
   
 
0.940
LOC102744816
Heterogeneous nuclear ribonucleoprotein C-like isoform X1.
   
 
 0.799
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
   
 
 0.757
ZFR
Zinc finger RNA-binding protein isoform X1.
   
 
0.717
SNRPD2
Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome.
   
   0.705
RBM14
RNA-binding protein 14 isoform X1.
   
 
 0.703
KHDRBS1
KH domain-containing, RNA-binding, signal transduction-associated protein 1 isoform X1.
   
 
 0.689
FBL
rRNA 2'-O-methyltransferase fibrillarin isoform X1.
   
  
 0.682
LOC102746671
Heterogeneous nuclear ribonucleoprotein R-like.
   
 
 0.680
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.